• About me
  • Experience
  • Selected publications
  • Reviews
  • Talks
  • Teaching
  • Supervision
  • CV
  • Talks
    • Invited speaker at Astrazeneca, Computational Biology Seminar
    • Principles of multi-omics data integration (Cambridge AI Club for Biomedicine)
    • Invited speaker at Harvard Medical School, Centre for Computational Biology Seminar Series
    • Poster presentation at the Single Cell Genomics 2022 conference
    • Invited speaker at the Human Technopole
    • Keynote speaker at the EIPP Bioinformatics Course for EMBL PhD students
    • Data integration techniuqes for the 10x Chromium single-cell Multiome technology (10x Genomics Webinar Series)
    • Invited speaker at the 'ELIXIR Omics Integration and Systems Biology' course
    • Invited speaker at Festival of Genomics
    • Workshop on Methods in Integrative Genomics, organised by the Royal Statistical Society (London, 2020)
    • Invited participant at the Mathematical Frameworks for Integrative Analysis of Emerging Biological Data Types
    • Invited speaker at the PRBB Computational Genomics Seminar
    • Invited speaker at the German Conference in Bioinformatics
    • Poster presentation at the conference 'Biology of Genomes'
    • Selected speaker at the Single Cell Genomics conference
    • Selected speaker at the Mathematical and Statistical Aspects of Molecular Biology conference
    • Poster presentation at the Single Cell Genomics 2017 conference
    • Selected talk at the conference 'From Single- to Multiomics: Applications and Challenges'
    • Selected talk at the 4th Bioinformatics and Genomics Symposium
  • Blog
    • 🎉 Easily create your own simple yet highly customizable blog
    • 🧠 Sharpen your thinking with a second brain
    • 📈 Communicate your results effectively with the best data visualizations
    • 👩🏼‍🏫 Teach academic courses
    • ✅ Manage your projects
  • Projects
    • Pandas
    • PyTorch
    • scikit-learn
  • Experience
  • Reviews
    • Gene regulatory network inference in the era of single-cell multi-omics
    • Computational principles and challenges in single-cell data integration
  • Teaching
    • MOFA workshop (VIB Training, 2018-2022)
    • Demonstrator at the course 'Integrative analysis of multi-omics data' (EMBL, 2022)
    • Instructor at the IARC-SIB course: 'Multivariate analysis for -omics data integration: principles and applications'
    • Adjunct professor, MSc Bioinformatics at Universitat Pompeu Fabra (2020-2022)
    • Adjunct professor, MSc Bioinformatics at Universitat Pompeu Fabra
    • Adjunct Professor, BSc Human Biology at Universitat Pompeu Fabra (2020 and 2021)
    • Demonstrator at the course 'Systems biology: From large datasets to biological insight' (EMBL-EBI)
    • Demonstrator at the course 'Introduction to multiomics data integration' (EMBL-EBI, 2018 and 2019)
    • Supervisor at the BSc course 'Mathematical Biology' at Cambridge University (2017-2020)
    • Teaching assistant, MSc Bioinformatics at Copenhagen University (2015-2016)
  • Publications
    • Decoding gene regulation in the mouse embryo using single-cell multi-omics
    • Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO
    • Inter-gastruloid heterogeneity revealed by single cell transcriptomics time course: implications for organoid based perturbation studies
    • Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during mouse early organogenesis
    • Integrative Transkingdom Analysis of the Gut Microbiome in Antibiotic Perturbation and Critical Illness
    • scMET: Bayesian modeling of DNA methylation heterogeneity at single-cell resolution
    • MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
    • Multi-omics profiling of mouse gastrulation at single-cell resolution
    • Multi-Omics Factor Analysis-a framework for unsupervised integration of multi-omics data sets
    • scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
  • Supervision
    • Brendan Terry (2021-2022): Multi-modal CRISPR screenings at single-cell resolution
    • Bart Theeuwes (2021 - 2022): Deciphering gene regulatory network control of embryonic haematopoiesis from single-cell multi-modal data
    • Gavin Li (2021 - 2022): modelling gene regulatory networks from single-cell multi-modal data
    • Yonatan Deloro (2018): Factor Analysis Models for Genomics data

Invited speaker at Festival of Genomics

Jan 27, 2021 · 0 min read
Last updated on Jan 27, 2021
Ricard Argelaguet
Authors
Ricard Argelaguet
Senior Research Scientist
← Invited speaker at the 'ELIXIR Omics Integration and Systems Biology' course Sep 6, 2021
Workshop on Methods in Integrative Genomics, organised by the Royal Statistical Society (London, 2020) Jan 1, 2021 →

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